• Physics of Gene Regulations

  • Response dynamics of molecular networks

  • Transcription dynamics and regulation

  • Molecular switches and epigenetics

  • Translation dynamics and regulation

• Models of Biological circuits

  • Network measures and comparisons

  • Molecular Networks

  • Molecular switches and epigenetics

  • Oscillations in Genetic Networks

  • Transcription dynamics and regulation

  • Translation dynamics and regulation

• Networks and Communication

  • Hide and Seek on Networks

  • Hierarchical Networks

  • Internet

  • Network measures and comparisons

  • Social networking

  • City Networks

• Evolution and dynamical systems

  • Evolution, analysis and modeling

  • Dynamics of network structure

  • Collective Behaviour

  • Extended dynamical systems

Protein concentrations in a living cell are regulated through production and degradation. Production, in turn, can be regulated at either the transcriptional or the translational stage. Transcriptional regulation can involve protein binding to operators, DNA looping and sometimes also antagonistic RNA polymerases moving along the DNA and interfering with the activity of a given promoter.
In the center we develop physical models of case studies from biology where each of these regulations occur.